Piálek, J., M. Vyskočilová, B. Bímová, D. Havelková, J. Piálková, P. Dufková, V. Bencová, Ľ. Ďureje, T. Albrecht, H. C. Hauffe, M. Macholán, P. Munclinger, R. Storchová, A. Zajícová, V Holán, S Gregorová, and J. Forejt. 2008. Development of unique house mouse resources suitable for evolutionary studies of speciation. Journal of Heredity 99(1): 34-44.

Macholán, M., S. J. E. Baird, P. Munclinger, P. Dufková, B. Bímová, and J. Piálek. 2008. Genetic conflict outweighs heterogametic incompatibility in the mouse hybrid zone? BMC Evolutionary Biology 8: 271.

Trachtulec Z., C. Vlcek, O. Mihola, S. Gregorová, V. Fotopulosova, J. Forejt. 2008. Fine haplotype structure of a chromosome 17 region in the laboratory and wild mouse. Genetics 178(3): 1777-1784

Vyskočilová M. 2008. Hybridní sterilita samců myši domácí. Hybrid male sterility in the house mouse. [In Czech]. Masaryk University Brno: 48 pp.

Bímová, B., Albrecht T., Macholán M., Piálek J. 2009. Signalling components of the house mouse mate recognition system. Behavioural Processes 80(1): 20-27.

Kawałko, A., P. Dufková, J. M. Wójcik, J. Piálek. 2009. Polymerase chain reaction multiplexing of microsatellites and single nucleotide polymorphism markers for quantitative trait loci mapping of wild house mice. Molecular Ecology Resources 9(1): 140-143.

Vyskočilová, M., G. Pražanová, J. Piálek. 2009. Polymorphism in hybrid male sterility in wild-derived Mus musculus musculus strains on proximal chromosome 17. Mammalian Genome 20(2): 83-91.

Sýkorová D. 2010. Behaviorální a fyziologické aspekty exploračního chování myši domácí (Mus musculus). [Behavioural and physiological aspects of the explorational behaviour of the house mouse (Mus musculus)] [In Czech]. Masaryk University Brno: 46 pp.

Boell, L., Tautz D. 2011. Micro-evolutionary divergence patterns of mandible shapes in wild house mouse (Mus musculus) populations. BMC Evolutionary Biology 11: 306.

Čížková, D., J. Güoy de Bellocq, S. J. E. Baird, J. Piálek, J. Bryja. 2011. Genetic structure and contrasting selection pattern at two major histocompatibility complex genes in wild house mouse populations. Heredity 106(5): 727-740.

Dufková, P. 2011. Sex chromosomes in a house mouse hybrid zone. PhD Thesis. Přírodovědecká fakulta, Jihočeská univerzita, České Budějovice: 75 pp.

Ďureje, L., B. Vošlajerová Bímová, J. Piálek. 2011. No postnatal maternal effect on male aggressiveness in wild strains of house mice. Aggressive Behavior 37(1): 48-55.

Homolka, D., R. Ivanek, J. Forejt, P. Jansa. 2011. Differential expression of non-coding RNAs and continuous evolution of the X chromosome in testicular transcriptome of two mouse species. PLoS ONE 6(2): e17198.

Macholán M., S. J. E. Baird, P. Dufková, P. Munclinger, B. Vošlajerová Bímová, J. Piálek. 2011. Assessing multilocus introgression patterns: A case study on the mouse X chromosome in Central Europe. Evolution 65(5): 1428-1446.

Munclinger P. 2011. Domácí myš z pohledu evoluční genetiky [The house mouse from the perspective of evolutionary genetics]. Habilitační práce [Thesis of Habilitation]. Faculty of Natural Sciences, Charles University in Prague. Prague: 32 pp.

Pražanová G. 2011. Vliv hybridizace na spermatogenezi a poměr pohlaví u myši domácí. The effect of hybridization on spermatogenesis and sex ratio in the house mouse. [In Czech]. Master Thesis. Masaryk University Brno: 52 pp.

Vošlajerová Bímová B., Macholán M., Baird S. J. E., Munclinger P., Laukaitis C. M., Karn R. C., Luzynski K., Tucker P. K., Piálek J. 2011. Reinforcement selection acting on the European house mouse hybrid zone. Molecular Ecology 20(11): 2403-2424.

White, M.E., Steffy, B., Wiltshire, T., Payseur, B. A. 2011. Genetic dissection of a key reproductive barrier between nascent species of house mice. Genetics 189(1): 289-304.

Yang, H., Wang, J.R., Didion, J. P., Buus, R. J., Bell, T. A., Welsh, C. E., Bonhomme, F., Yu, A. H.-T., Nachman, M., Piálek, J., Tucker, P., Boursot, P., McMillan, L., Churchill, G. A., Pardo-Manuel de Villena, F. 2011. Subspecific origin and haplotype diversity in the laboratory mouse. Nature Genetics 43(7): 648-655.

Albrechtová J., Albrecht T., Baird S. J. E., Macholán M., Rudolfsen G., Tucker P. K., Piálek J. 2012. Sperm-related phenotypes implicated in both maintenance and breakdown of a natural species barrier in the house mouse. Proceedings of the Royal Society B-Biological Sciences 279(1748): 4803–4810.

Auffray J.-C., Britton-Davidian J. 2012. The house mouse and its relatives: systematics and taxonomy. In: Macholán M., Baird S.J.E., Munclinger P., Piálek J. (eds.). Evolution of the House Mouse. Cambridge University Press, Cambridge: 1–34.

Ďureje Ľ. 2012. The effect of aggressive behaviour on the dynamics of the house. PhD Thesis. Masaryk University Brno: 33 pp.

Ďureje Ľ., Macholán M., Baird S. J. E., Piálek J. 2012. The mouse hybrid zone in Central Europe: from morphology to molecules. Folia Zoologica 61(3-4): 308–318.

Dzur-Gejdošová M., Šimeček P., Gregorová S., Bhattacharyya T., Forejt J. 2012. Dissecting the genetic architecture of F₁ hybrid sterility in house mice. Evolution 66(11): 3321–3335.

Flachs P., Mihola, O. Šimeček P., Gregorová S., Schimenti J. C., Matsui Y., Baudat F., de Massy B., Piálek J., Forejt J., Trachtulec Z. 2012. Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genetics 8(11): e1003044.

Forejt J., Piálek J., Trachtulec Z. 2012. Hybrid male sterility genes in the mouse subspecific crosses. In: Macholán M., Baird S. J. E., Munclinger P., Piálek J. (Eds.). Evolution of the House Mouse. Cambridge University Press: 482–503.

Hiadlovská Z., Strnadová M., Macholán M., Vošlajerová-Bímová B. 2012. Is water really a barrier for the house mouse? A comparative study of two mouse subspecies. Folia Zoologica 61(3-4): 319–329.

Homolka D. 2012. Meiotic Sex Chromosome Inactivation in Mouse Spermatogenesis. PhD Thesis. Charles University in Prague: 114 pp.

Phifer-Rixey M., Bonhomme F., Boursot P., Churchill G. A., Piálek J., Tucker P., Yang H., Nachman M. 2012. Adaptive evolution and effective population size in wild house mice. Molecular Biology and Evolution 29(10): 2949–2955.

Wasimuddin, Čížková D., Ribas A., Piálek J., Goüy de Bellocq J., Bryja J. 2012. Development and characterization of polymorphic microsatellite markers for Syphacia obvelata. Molecular and Biochemical Parasitology 185: 154–156.

White M. A., Stubbings M., Dumont B. L., Payseur,B. A. 2012. Genetics and evolution of hybrid male sterility in house mice. Genetics 191(3): 917–934.

Bainová Z. 2013. Polymorphism of TLR2/TLR1 and TLR2/TLR6 heterodimers in wild-derived house mouse inbred strains. [In Czech]. Master thesis. Charles University Prague: 70 pp.

Bhattacharyya T., Reifova R., Gregorova S., Simecek P., Gergelits V., Mistrik M., Martincová I., Piálek J., Forejt J. 2013. X chromosome controls meiotic chromosome synapsis in mouse inter-subspecific hybrids. PLoS Genetics 10(2): e1004088.

Calaway J. D., Lenarcic A. B., Didion J. P., Wang J. R., Searle J. B., McMillan L., Valdar W., Pardo-Manuel de Villena F. 2013. Genetic architecture of skewed X inactivation in the laboratory mouse. PLoS Genetics 9(10): e1003853.

Fornůsková A. 2013. Genes of innate immunity and their significance in evolutionary ecology of free living rodents. PhD thesis. Masaryk University Brno and University Montpellier II: 189 pp.

Hiadlovská Z., B. Vošlajerová Bímová, O. Mikula, J. Piálek, M. Macholán. 2013. Transgressive segregation in a behavioural trait? Explorative strategies in two house mouse subspecies and their hybrids. Biological Journal of the Linnean Society 108(1): 225–235.

Kváč M., McEvoy J., Loudová M., Stenger B., Sak B., Květoňová D., Ditrich O., Rašková V., Moriarty E., Rost M., Macholán M., Piálek J. 2013. Coevolution of Cryptosporidium tyzzeri and the house mouse (Mus musculus). International Journal for Parasitology 43(10): 805–817.

Albrechtová J., Albrecht T., Ďureje Ľ., Pallazola V. A., Piálek J. 2014. Sperm morphology in two house mouse subspecies: Do wild-derived strains and wild mice tell the same story? PLoS ONE 9(12): e115669.

Bílková B. 2014. Variability in health state of mice in Mus musculus musculus and Mus musculus domesticus hybrid zone. [In Czech]. Master Thesis. Charles University Prague: 83pp.

Flachs P., Bhattacharyya T., Mihola O., Piálek J., Forejt J., Trachtulec Z. 2014. Prdm9 incompatibility controls oligospermia and delayed fertility but no selfish transmission in mouse intersubspecific hybrids. PLoS ONE 9(4): e95806.

Fornůsková A., Bryja J., Vinkler M., Macholán M., Piálek J. 2014. Contrasting patterns of polymorphism and selection in bacterial-sensing Toll-like receptor 4 in two house mouse subspecies. Ecology and Evolution 4(14): 2931–2944.

Hiadlovská Z. 2014. Behavioural strategies of two house mouse subspecies (Mus musculus musculus, M. m. domesticus). PhD Thesis. Masaryk University Brno: 37 pp.

Hiadlovská Z., Macholán M., Mikula O., Vošlajerová Bímová B. 2014. The meek inherit the earth: Less aggressive wild mice are more successful in challenging situations. Biological Journal of the Linnean Society 113(1): 310–319.

Kreisinger J. Čížková D., Vohánka J. Piálek J. 2014. Gastrointestinal microbiota of wild and inbred individuals of two house mouse subspecies assessed using high throughput parallel pyrosequencing. Molecular Ecology 23(20): 5048–5060.

Wasimuddin. 2014. Genetic variation of selected pathogens in the house mouse hybrid zone. PhD Thesis. Masaryk University Brno: 91 pp.

Hamplová P. 2015. Ontogeneze agresivity a její hormonální mechanismy se zaměřením na myš domácí. [The ontogeny of aggression and endocrinology mechanisms of social behaviour development – a House mouse model.] [In Czech]. Bachelor Thesis. Masaryk University Brno: 73 pp.

Hiadlovská Z., Mikula O., Macholán M., Hamplová P., Vošlajerová Bímová B., Daniszová K. 2015. Shaking the myth: Body mass, aggression, steroid hormones, and social dominance in wild house mouse. General and Comparative Endocrinology 223: 16-26.

Kropáčková L., Piálek J., Gergelits V., Forejt J., Reifová R. 2015. Maternal-fetal genomic conflict and speciation: no evidence for hybrid placental dysplasia in crosses between two house mouse subspecies. Journal of Evolutionary Biology 28(3): 688–698.

Bílková B., Albrecht T., Chudíčková M., Holáň V., Piálek J., Vinkler M. 2016. Application of Concanavalin A during immune responsiveness skin-swelling tests facilitates measurement interpretation in mammals. Ecology and Evolution 6(13): 4551–4564.

Veiserová D. 2016. Vliv přítomnosti otce na explorační chování potomků – model myši domácí. [Is there any effect of the presence of father on the House mouse offspring exploratory behaviour?] [In Czech] Masaryk University Brno: 69 pp.

Vošlajerová Bímová B., Mikula O., Macholán M., Janotová K., Hiadlovská Z. 2016. Female house mice do not differ in their exploratory behaviour from males. Ethology 122(4): 298-307.

Hamplová P. 2017. Behaviorální a fysiologické aspekty sociální hierarchie samců myši domácí – příčiny či následky? Behavioural and physiological aspect of house mouse male social hierarchy – causes or consequences? [In Czech]. Master Thesis. Masaryk University Brno: 15 pp.

Larson E. L., Keeble S., Vanderpool D., Dean M. D., Good J. M. 2017. The composite regulatory basis of the large X-effect in mouse speciation. Molecular Biology and Evolution 34(2): 282-295.

Burgstaller J., Kolbe T., Havlicek V., Hembach S., Poulton J., Piálek J., Steinborn R., Rülicke T., Brem G., Jones NS., Johnston IG. 2018. Large-scale genetic analysis reveals mammalian mtDNA population dynamics and heterogeneity during development and between generations. Nature Communications 9: 2488.

Edrisi M., Rajabi-Maham H., Hashemian N. 2018. Both environment and genetic makeup influence sexual behavior of house mouse. Iranian Journal of Science and Technology Transaction A-Science 42 (A4):1761-1769.

Larson E. L., Vanderpool D., Sarver B. A. J., Callahan C., Keeble S., Provencio L. L., Kessler M. D., Stewart V., Nordquist E., Dean M. D., Good J. M. 2018. The evolution of polymorphic hybrid incompatibilities in house mice. Genetics 209 (3):845-859.

Knutsen L. E., Dissen E., Saether P. C., Gyllensten Bjørnsen E., Piálek J., Storset A., Boysen P. 2019. Evidence of functional Cd94 polymorphism in a free-living house mouse population. Immunogenetics 71(4): 321-333.

Kotenkova E., Romachenko A., Ambaryan A. V., Maltsev A. 2019. Effect of early experience on neuronal and behavioral responses to con- and heterospecific odors in closely related Mus taxa: epigenetic contribution in formation of precopulatory isolation. BMC Evolutionary Biology 19(Suppl 1): 51.

Martincová I. 2019. Spermatogenetic defects in mouse hybrids. PhD Thesis. Masaryk University Brno: 145 pp.

Martincová I., Ďureje Ľ., Kreisinger J., Macholán M., Piálek J. 2019. Phenotypic effects of the Y chromosome are variable and structured in hybrids among house mouse recombinant lines. Ecology and Evolution: 9(10): 6124-6137.

Oka A., Shiroishi T. 2012. The role of the X chromosome in house mouse speciation. In: Macholán M., Baird S. J. E., Munclinger P., Piálek J. (Eds.). Evolution of the House Mouse. Cambridge University Press: 431-454.

Vošlajerová Bímová B., Macholán M., Ďureje Ľ., Berchová K., Martincová I., Piálek J. 2020. Sperm quality, aggressiveness and generation turnover may facilitate unidirectional Y chromosome introgression across the European house mouse hybrid zone. Heredity 125(4): 200–211.

Balard A., Jarquín-Díaz V.H., Jost J., Mittné V., Böhning F., Ďureje Ľ., Piálek J., Heitlinger E. 2020. Coupling between tolerance and resistance for two related Eimeria parasite species. Ecology and Evolution 10: 13938–13948.

Mukaj A., Piálek J., Fotopulosova V., Morgan A.P., Odenthal-Hesse L., Parvanov E., Forejt J. 2020. Prdm9 inter-subspecific interactions in hybrid male sterility of house mouse. Molecular Biology and Evolution: 37(12): 3423–3438.

Davies B., Hinch A. G., Cebrian-Serrano A., Alghadban S., Becker P. W., Biggs D., Hernandez-Pliego P., Preece C., Moralli D., Zhang G., Myers S., Donnelly P. 2021. Altering the binding properties of PRDM9 partially restores fertility across the species boundary. Molecular Biology and Evolution 38(12): 5555–5562.

Jarquin-Diaz, V. H., Balard, A., Ferreira, S. C. M., Mittne, V., Murata, J. M., Heitlinger, E. 2022. DNA-based quantification and counting of transmission stages provides different but complementary parasite load estimates: an example from rodent coccidia (Eimeria). Parasites & Vectors 15(1): 45.

Stopková R., Matějková T., Dodoková A., Talacko P., Žáček P., Sedláček R, Piálek J., Stopka P. 2023. Variation in mouse chemical signals is genetically controlled and environmentally modulated. Scientific Reports 13: 8573.

Harr, B., Karakoc, E., Neme, R. et al. 2016. Genomic resources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus. Scientific Data 3: 160075.

Liu M., Yu C., Zhang Z., Song M., Sun X., Piálek J., Jacob J., Lu J., Cong L., Zhang H., Wang Y., Li G., Feng Z., Du Z., Wang M., Wan X., Wang D., Wang Y.-L., Li H., Wang Z., Zhang B., Zhang Z. 2022. Whole-genome sequencing reveals the genetic mechanisms of domestication in classical inbred mice. Genome Biology 23(1): 203.

Ferreira S. C. M., Jarquín‑Díaz V. H., Heitlinger E. 2023. Amplicon sequencing allows differential quantification of closely related parasite species: an example from rodent Coccidia (Eimeria). Parasites & Vectors 16(1): 204.

Macholán, M., Daniszová, K., Hiadlovská, Z. 2023. The expansion of house mouse major urinary protein genes likely did not facilitate commensalism with humans. Genes 14(11): 2090.

Piálek J., Ďureje Ľ., Hiadlovská Z., Kreisinger J., Aghová T., Bryjová A., Čížková D., Goüy de Bellocq J., Hejlová H., Janotová K., Martincová I., Orth A., Piálková J., Pospíšilová I., Rousková L., Vošlajerová Bímová B., Bonhomme F., Forejt J., Macholán M., Klusáčková P. 2023. Phenogenomic resources immortalized in a panel of wild-derived strains of five species of house mice. BioRxiv: https://doi.org/10.1101/2023.11.05.565684.

Zhukova G., Frantsiyants E., Shikhlyarova A., Kaplieva I., Trepitaki L., Kachesova P., Galina A., Ushakova N., Shalashnaya E., Ishonina O. 2023. Features of blood parameters and adaptational status of Balb/c and C57Bl/6 mice lines in the absence of special influences. South Russian Journal of Cancer 4(4): 44–56.

Piálek J. (Forthcoming 2024). Phenotypic resources immortalized in a panel of wild-derived strains of five species of house mice [Dataset]. Dryad.

Ferreira, S. C. M., Jarquín-Díaz V. H., Planillo A., Ďureje Ľ., Martincová I., Kramer-Schadt S., Forslund-Startceva S. K., Heitlinger E. 2024. Eco-evolutionary dynamics of host–microbiome interactions in a natural population of closely related mouse subspecies and their hybrids. Proceedings of the Royal Society B: Biological Sciences 291(2037): 20241970